| FASTA to multi-FASTA converter
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Mac Windows |
| This freeware tool will look for all FASTA files in the specified folder and will merge their content in a single file, generating a standard or custom Multi-FASTA file. FREEWARE! |
 Web Site: FASTA 2 multiFASTA
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| Multi-FASTA to FASTA converter
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Mac Windows |
| This FREEWARE program will split a multi-FASTA file in multiple standard FASTA files. |
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Web Site: multiFASTA spliter
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| ABI to FASTA free converter
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Windows |
| This free tool will batch convert all (selected) ABI files to FASTA files. All you need to do is to locate your ABI chromatogram files and press the CONVERT button. With this automatic converter you can convert hundreds or thousands of ABI chromatogram files in seconds. All with A SINGLE PUSH OF A BUTTON! ---------- No installation process is required. |
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Web Site: DNA Baser Contig Assembler
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| AssayZap 2.5
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Mac |
| Zap is an assay analysis tool usable for general assay purposes but with special tools to facilitate automatic assay equipment used for ELISA, RIA and IRMA. 68k and PPC versions included. Demo Only. |
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Download (269 kb, 02-Feb-1995) |
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| AssayZap 2.5 Information
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Mac |
| Zap is an assay analysis tool usable for general assay purposes but with special tools to facilitate automatic assay equipment used for ELISA, RIA and IRMA. Information file only. |
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Download (3 kb, 02-Feb-1995) |
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| BIOSTAT B
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Windows |
| Control and collection software for the BioStat B fermentor. The BioStat control program collects process data and display them in a graphical window. A graphical control interface is used to control/set all setpoints and numerical displays show the current settings. When a fermentation run is started, date and time is registered and total fermentation time is recorded. It is possible to make timed events and profiles, and intelligent substrate control is in the hands of a fuzzy logic module. A internet client is available, thus you can control and evaluate a fermentation run from an off-site computer. |
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Web Site: Protein Chemistry Laboratory, University of Aarhus
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| BLAST 2.0
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Internet Browser MS-DOS |
| A tool used to identify any potential homologies of a given DNA or protein sequence with those stored in GenBank. |
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Web Site: NCBI
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| Beacon Designer
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Mac Windows |
| Beacon Designer is a tool for designing probes and primers for real time detection of PCR products. Designs primers and probes for multiplex and allele discrimination assays. Displays secondary structures in a simple graphical format. Uses statistical optimization techniques to output the best rated primer/probe pair. Generates a list of alternate probes to meet specific research needs. Allows complete control over design parameters. Evaluates pre-designed/published beacons and primers. Integrates to web to BLAST search and open sequences from Entrez. Exports results in a tab delimited format ready to be loaded into a database, spreadsheet, or sent for oligo synthesis. |
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Web Site: PREMIER Biosoft
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| Becoming a Successful Scientist
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Internet Browser |
| Provides information and links of interest on succeeding in scientific research. |
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Web Site: Becoming a Successful Scientist
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| BioReagent LIMS
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| BioRoot Bioinformatics is a non-profit organization dedicated to fostering communication, collaboration, and increased productivity in the biological sciences through information exchange. We provide a free centralized database service to collect, store, and disseminate information about commonly used molecular biology reagents: oligonucleotides, plasmids, and strains. Use of this bio-reagent LIMS will cut costs, save time, and accelerate research benefiting the bench scientist, the PI, and the patient. |
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Web Site: BioRoot Bioinformatics
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| BioToolKit
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Mac Windows |
| BioToolKit is a collection of tools frequently used by bench biomedical scientists. Functions include centrifugation speed/force conversion, molecular weight calculation for chemicals, oligos, and peptides, molar concentration calculator, OD calculator, recipe calculator, clinical calculator, primer design, peptide antigen design, grade book, and label printing. |
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Web Site: Chang Bioscience
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| Biocompare
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Internet Browser |
| Biocompare helps life scientists find scientific products by providing complete, unbiased product information, including reviews, profiles of new technologies and links directly to supplier product pages. With Biocompare, perform side-by-side comparisons of product specifications and prices, to make informed decisions. |
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Web Site: Biocompare
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| Bioexplorer Toolbar
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Internet Browser Windows |
| The Bioexplorer Toolbar is the fastest and easiest way to get the information you want from NCBI databases (PubMed, Protein, Nucleotide, and Taxonomy) and from other biological Web resources. It also allows you to search Google, Britannica and Amazon books directory and contains links for fast redirection to literature databases, companies websites, BLAST, ClustalW et.c. All previous searches (up to 20) are stored in the history box. You can clear the history box from the Bioexplorer Toolbar main menu by clicking |
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Web Site: Bioexplorer Toolbar
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| Biological Research Protocol Books
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Internet Browser |
| Comprehensive and organized list of protocol books in biochemistry, molecular biology, and other life sciences. |
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Web Site: Biological Research Protocol Books
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| CIP
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MS-DOS |
| This program is used to determine the amount of CIP (Calf Intestinal Phosphatase) to add to the CIP reaction. |
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Download (45 kb, 16-Jan-1990) |
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| CLONES
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MS-DOS |
| CLONES is a database for the products of molecular biology techniques. Stores data about bacterial strains, cloning vectors (phage and plasmid), recombinant clones, and recombinant libraries. |
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Download (165 kb, 07-Mar-1990) |
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| Chromatogram Explorer-Exploring and trimming your chromatograms is not a problem anymore
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Mac Windows |
| Chromatogram Explorer is a very easy to use tool that will list all chromatogram files (SCF, ABI, AB1, AB) in the current folder. You can view the chromatograms while browsing through folders using its integrated Windows Explorer. Chromatogram Explorer can also trim low quality bases at the ends of your samples with a single push of a button! Now you can process/sort/search chromatograms in seconds. |
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Web Site: DNA Baser - Free biology software
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| Clone
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MS-DOS |
| This program is a database management system for recombinant DNA clones and hosts. |
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Download (92 kb, 16-Mar-1990) |
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| CloneIt
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Internet Browser Unix |
| A program for use in plasmid cloning to quickly find in-frame deletions, sub-cloning, and frameshifts strategies. |
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Web Site: Institut National de la Recherche Agronomique
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| CloneTracker
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Windows |
| On-demand production of custom high-density arrays appropriate to any conceivable gene expression studies is now possible on the lab benchtop. With the new arrayer instruments, probes can be dispensed accurately and precisely in any desired grid configuration. But organizing and programming the deposition of thousands of probes per array and managing the fabrication process to assure correct identification of each probe is a daunting task. CloneTracker was created specifically for the purpose of automating microarray production and management. |
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Web Site: BioDiscovery
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| Cloning
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MS-DOS |
| This program calculates: (a) the probability of a gene being intact in one of more of a given number of clones, and (b) the number of clones a gene library should contain for there to be a given probability of the gene being intact in some clone. |
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Download (65 kb, 02-Jun-1994) |
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| CryoTrack IMS
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Windows |
| CryoTrackIMS is a complete software package - ideal for molecular biology, cell banks, cellular biology, clinical samples, chemical labs, biochemistry, immunology and protein labs, high-throughput screening, QA, IVF labs and core facilities. Suitable for all storage formats and locations such as liquid nitrogen, freezers, refrigerators and room temperature storage. |
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Web Site: CryoTrack Sample Tracking Software
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| Cutcosts 2.31
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MS-DOS |
| CUTCOSTS was written in order to help finding the most inexpensive way through the jungle of restriction enzyme prices. |
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Download (75 kb, 05-Jun-1991) |
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| DIG - Analysis, Reporting, Intelligence
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Linux Unix Windows |
| DIG is a Data Analysis, Reporting, Intelligence tool for data workers, labs, and webmasters. Use DIG to clean up duplicates, consolidate, trim, query, summarize large data set in Excel/Access, log files, Oracle, MySQL, lab or POS systems, or any databases. Comes with powerful Excel/Access add-ons, ad-hoc query & multi-dimensional analysis. Watch on-line demo, get a free 30-day trial, then pay $96/yr or $8/month. |
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Web Site: DigDB
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| DNA Counter
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Mac Windows |
This FREEWARE tool will show the proportions between nucleotides in a DNA sequence. You do not need to install it or unpack it. Just download the program and double click to run it. It does not need additional software/add-ons/Java or VBRun packages to run. To uninstall it just delete the program.  |
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Web Site: DNA Counter
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